Building on laodoke.caelum.ci.dev
(from ocaml/opam:debian-unstable)
Unable to find image 'ocaml/opam:debian-unstable' locally
debian-unstable: Pulling from ocaml/opam
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Digest: sha256:75da64e0a79592579a874efe1cabf91a3a62bcde64f7b643dd374f1913e5a96b
Status: Downloaded newer image for ocaml/opam:debian-unstable
2026-04-01 10:17.26 ---> using "0acd5aeaa8f7bc314514d9795d14a7f12ec72a6a5b11c5904350189734c6859b" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (env CI true)
/: (env OPAM_HEALTH_CHECK_CI true)
/: (run (shell "sudo ln -f /usr/bin/opam-dev /usr/bin/opam"))
2026-04-01 10:17.26 ---> using "40df4fa4cdfc68a5fa7a326047e82a7adc5df52b8059d4a7b745bdd50aad56e7" from cache
/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q 4b07b3403ca6031c1a5af00d48d6aa90de102e54"))
2026-04-01 10:17.26 ---> using "a1e7bc0c040cc018de885422d43734657f50491b2b6f19af3c166690126816cd" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
2026-04-01 10:17.26 ---> using "534ec631cbc3e509d0d261c9ef2627ba1ac412d1d106d27dbd9c544d0da8e6ab" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "sudo apt update && sudo apt install autoconf -y"))
WARNING: apt does not have a stable CLI interface. Use with caution in scripts.
Get:1 http://deb.debian.org/debian unstable InRelease [187 kB]
Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-04-01-0800.35-F-2026-03-28-0800.33.pdiff [400 kB]
Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2026-04-01-0800.35-F-2026-03-28-0800.33.pdiff [400 kB]
Fetched 650 kB in 2s (286 kB/s)
Reading package lists...
Building dependency tree...
Reading state information...
6 packages can be upgraded. Run 'apt list --upgradable' to see them.
WARNING: apt does not have a stable CLI interface. Use with caution in scripts.
Reading package lists...
Building dependency tree...
Reading state information...
Solving dependencies...
The following packages were automatically installed and are no longer required:
libproc2-0 procps psmisc
Use 'sudo apt autoremove' to remove them.
Installing:
autoconf
Installing dependencies:
automake autotools-dev m4
Suggested packages:
autoconf-archive gnu-standards autoconf-doc libtool gettext m4-doc
Summary:
Upgrading: 0, Installing: 4, Removing: 0, Not Upgrading: 6
Download size: 1763 kB
Space needed: 5356 kB / 144 GB available
Get:1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB]
Get:2 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-6 [494 kB]
Get:3 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB]
Get:4 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-4 [877 kB]
Fetched 1763 kB in 0s (29.5 MB/s)
Selecting previously unselected package m4.
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(Reading database ... 22112 files and directories currently installed.)
Preparing to unpack .../archives/m4_1.4.21-1_amd64.deb ...
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Selecting previously unselected package autoconf.
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Preparing to unpack .../automake_1%3a1.18.1-4_all.deb ...
Unpacking automake (1:1.18.1-4) ...
Setting up m4 (1.4.21-1) ...
Setting up autotools-dev (20240727.1) ...
Setting up autoconf (2.72-6) ...
Setting up automake (1:1.18.1-4) ...
update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode
2026-04-01 10:17.26 ---> using "786b4d20d4e41506c48fdee2d643c656a887d3c15a92e52bdded13e6f8057b48" from cache
/: (run (network host)
(shell "git clone -q 'https://github.com/oxcaml/opam-repository' ~/'oxcaml' && git -C ~/'oxcaml' checkout -q dde24fbc07390ada8c41508871d4741e06069241"))
2026-04-01 10:17.26 ---> using "c89deb80be9cd21e8794570ebf2bcbbe746333327b90fd6e79241d7cdad9a2ab" from cache
/: (run (shell "opam repository add --dont-select 'oxcaml' ~/'oxcaml'"))
[oxcaml] Initialised
2026-04-01 10:17.26 ---> using "464f4736676353abc80160646c5d6159e0eba9cb3f27c4f3410c312bfd0c87ee" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=oxcaml,default '5.2.0+flambda2' '5.2.0+ox'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-variants" {= "5.2.0+ox"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved ocaml-config.3 (cached)
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> installed ocaml-options-vanilla.1
-> installed conf-autoconf.0.2
-> installed conf-which.1
-> retrieved ocaml-variants.5.2.0+ox (https://github.com/oxcaml/oxcaml/archive/refs/tags/5.2.0minus-25.tar.gz)
-> installed ocaml-variants.5.2.0+ox
-> installed ocaml-config.3
-> installed ocaml.5.2.0
-> installed base-domains.base
-> installed base-nnp.base
Done.
# To update the current shell environment, run: eval $(opam env --switch=5.2.0+flambda2)
2026-04-01 10:17.26 ---> using "270b00d3b80a3bbafc42a02ec313b62116b195465706442a3e2ff51bce951dc5" from cache
/: (run (network host)
(shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Hit:1 http://deb.debian.org/debian unstable InRelease
- Reading package lists...
-
2026-04-01 10:17.26 ---> using "fba65304007c7ca110b3b0b63f07480abc11c92aa5c8c6998f0e41ecbbdba338" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam remove -y orsvm_e1071.4.0.0\
\nopam install -vy orsvm_e1071.4.0.0\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: orsvm_e1071.4.0.0 | grep -q 'debian-unstable'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi \
\n\
\n\
\nexit $res"))
[NOTE] orsvm_e1071.4.0.0 is not installed.
Nothing to do.
The following actions will be performed:
=== install 4 packages
- install conf-r 1.0.0 [required by orsvm_e1071]
- install dolog 6.0.0 [required by orsvm_e1071]
- install dune 3.22.0 [required by orsvm_e1071]
- install orsvm_e1071 4.0.0
The following system packages will first need to be installed:
r-base-core
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
opam believes some required external dependencies are missing. opam can:
> 1. Run apt-get to install them (may need root/sudo access)
2. Display the recommended apt-get command and wait while you run it manually (e.g. in another terminal)
3. Continue anyway, and, upon success, permanently register that this external dependency is present, but not detectable
4. Abort the installation
[1/2/3/4] 1
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "r-base-core"
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- Adding 'diversion of /usr/bin/luit to /usr/bin/luit.x11-utils by luit'
- Adding 'diversion of /usr/share/man/man1/luit.1.gz to /usr/share/man/man1/luit.x11-utils.1.gz by luit'
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- Preparing to unpack .../155-r-cran-class_7.3-23-1_amd64.deb ...
- Unpacking r-cran-class (7.3-23-1) ...
- Selecting previously unselected package r-cran-cluster.
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- Unpacking r-cran-cluster (2.1.8.2-1) ...
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- Unpacking r-cran-codetools (0.2-20-1) ...
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- Unpacking r-cran-foreign (0.8.91-1) ...
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- Unpacking r-cran-kernsmooth (2.23-26-1) ...
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- Unpacking r-cran-lattice (0.22-9-1) ...
- Selecting previously unselected package r-cran-matrix.
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- Unpacking r-cran-matrix (1.7-5-1) ...
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- Unpacking r-cran-nlme (3.1.168-1) ...
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- Unpacking r-cran-mgcv (1.9-4-1) ...
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- Unpacking r-cran-nnet (7.3-20-1) ...
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- Unpacking r-cran-survival (3.8-6-1) ...
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- Unpacking r-cran-rpart (4.1.27-1) ...
- Selecting previously unselected package r-cran-spatial.
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- Unpacking r-cran-spatial (7.3-18-1) ...
- Selecting previously unselected package r-doc-html.
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- Unpacking r-doc-html (4.5.3-1) ...
- Selecting previously unselected package r-recommended.
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- Unpacking r-recommended (4.5.3-1) ...
- Selecting previously unselected package x11-utils.
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- Unpacking x11-utils (7.7+7) ...
- Selecting previously unselected package x11-xserver-utils.
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- Unpacking x11-xserver-utils (7.7+11) ...
- Selecting previously unselected package xdg-user-dirs.
- Preparing to unpack .../172-xdg-user-dirs_0.19-1_amd64.deb ...
- Unpacking xdg-user-dirs (0.19-1) ...
- Setting up libtext-iconv-perl:amd64 (1.7-8.1) ...
- Setting up libgraphite2-3:amd64 (1.3.14-13) ...
- Setting up libxcb-dri3-0:amd64 (1.17.0-2+b2) ...
- Setting up libpixman-1-0:amd64 (0.46.4-1+b1) ...
- Setting up libtext-charwidth-perl:amd64 (0.04-11+b5) ...
- Setting up libsharpyuv0:amd64 (1.5.0-0.1+b1) ...
- Setting up libx11-xcb1:amd64 (2:1.8.13-1) ...
- Setting up libpciaccess0:amd64 (0.17-3+b4) ...
- Setting up luit (2.0.20250912-1) ...
- Setting up libtie-ixhash-perl (1.23-4) ...
- Setting up libxcb-xfixes0:amd64 (1.17.0-2+b2) ...
- Setting up liblerc4:amd64 (4.1.0+ds-1) ...
- Setting up libxpm4:amd64 (1:3.5.17-1+b4) ...
- Setting up r-doc-html (4.5.3-1) ...
- Setting up libxi6:amd64 (2:1.8.2-2) ...
- Setting up libfont-afm-perl (1.20-4) ...
- Setting up libxrender1:amd64 (1:0.9.12-1+b1) ...
- Setting up libdatrie1:amd64 (0.2.14-1) ...
- Setting up xdg-user-dirs (0.19-1) ...
- Created symlink '/etc/systemd/user/graphical-session-pre.target.wants/xdg-user-dirs.service' → '/usr/lib/systemd/user/xdg-user-dirs.service'.
- Setting up libxcb-render0:amd64 (1.17.0-2+b2) ...
- Setting up libclone-perl:amd64 (0.50-1) ...
- Setting up libglvnd0:amd64 (1.7.0-3) ...
- Setting up libxml2-16:amd64 (2.15.2+dfsg-0.1) ...
- Setting up libio-stringy-perl (2.113-2) ...
- Setting up libdisplay-info3:amd64 (0.3.0-1) ...
- Setting up libtirpc-common (1.3.7+ds-1) ...
- Setting up libhtml-tagset-perl (3.24-1) ...
- Setting up libxcb-glx0:amd64 (1.17.0-2+b2) ...
- Setting up liblwp-mediatypes-perl (6.04-2) ...
- Setting up libcrypt-urandom-perl (0.55-1) ...
- Setting up libxcb-shape0:amd64 (1.17.0-2+b2) ...
- Setting up x11-common (1:7.7+26) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up libtry-tiny-perl (0.32-1) ...
- Setting up libsensors-config (1:3.6.2-2) ...
- Setting up libxxf86dga1:amd64 (2:1.1.5-1+b4) ...
- Setting up libdeflate0:amd64 (1.23-2+b1) ...
- Setting up perl-openssl-defaults:amd64 (7+b2) ...
- Setting up xkb-data (2.47-1) ...
- Setting up libencode-locale-perl (1.05-3) ...
- Setting up libxcb-shm0:amd64 (1.17.0-2+b2) ...
- Setting up libtext-wrapi18n-perl (0.06-10) ...
- Setting up libjbig0:amd64 (2.1-6.1+b3) ...
- Setting up libelf1t64:amd64 (0.194-4) ...
- Setting up libxxf86vm1:amd64 (1:1.1.4-2) ...
- Setting up libxcb-xkb1:amd64 (1.17.0-2+b2) ...
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- Setting up libxcb-present0:amd64 (1.17.0-2+b2) ...
- Setting up zip (3.0-15) ...
- Setting up libz3-4:amd64 (4.13.3-1+b1) ...
- Setting up libglib2.0-0t64:amd64 (2.88.0-1) ...
- No schema files found: doing nothing.
- Setting up libblas3:amd64 (3.12.1-7+b1) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libglib2.0-data (2.88.0-1) ...
- Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ...
- Setting up libdata-dump-perl (1.25-1) ...
- Setting up libxfixes3:amd64 (1:6.0.0-2+b5) ...
- Setting up libxcb-sync1:amd64 (1.17.0-2+b2) ...
- Setting up libipc-system-simple-perl (1.30-2) ...
- Setting up libxml-xpathengine-perl (0.14-2) ...
- Setting up libllvm21:amd64 (1:21.1.8-7) ...
- Setting up libio-compress-brotli-perl (0.019000-1) ...
- Setting up libfribidi0:amd64 (1.0.16-5) ...
- Setting up shared-mime-info (2.4-5+b3) ...
- Setting up libxinerama1:amd64 (2:1.1.4-3+b5) ...
- Setting up libxv1:amd64 (2:1.0.13-1) ...
- Setting up fonts-dejavu-mono (2.37-8) ...
- Setting up libpng16-16t64:amd64 (1.6.56-1) ...
- Setting up libio-html-perl (1.004-3) ...
- Setting up libxrandr2:amd64 (2:1.5.4-1+b4) ...
- Setting up libtcl8.6:amd64 (8.6.17+dfsg-1+b1) ...
- Setting up fonts-dejavu-core (2.37-8) ...
- Setting up libsensors5:amd64 (1:3.6.2-2+b1) ...
- Setting up libgfortran5:amd64 (16-20260322-1) ...
- Setting up libvulkan1:amd64 (1.4.341.0-1) ...
- Setting up libwebp7:amd64 (1.5.0-0.1+b1) ...
- Setting up libtimedate-perl (2.3500-1) ...
- Setting up sensible-utils (0.0.26) ...
- Setting up libxshmfence1:amd64 (1.3.3-1+b1) ...
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- Setting up libxcb-randr0:amd64 (1.17.0-2+b2) ...
- Setting up libthai-data (0.1.30-1) ...
- Setting up libwayland-egl1:amd64 (1.24.0-2+b2) ...
- Setting up libxss1:amd64 (1:1.2.3-1+b4) ...
- Setting up libxkbfile1:amd64 (1:1.1.0-1+b5) ...
- Setting up libpaper2:amd64 (2.2.5-0.3+b3) ...
- Setting up libdrm-common (2.4.131-1) ...
- Setting up libxcomposite1:amd64 (1:0.4.6-1+b1) ...
- Setting up readline-common (8.3-4) ...
- Setting up xdg-utils (1.2.1-2) ...
- update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
- Setting up liburi-perl (5.34-2) ...
- Setting up libx11-protocol-perl (0.56-9) ...
- Setting up ncurses-term (6.6+20251231-1) ...
- Setting up libxkbcommon0:amd64 (1.13.1-1) ...
- Setting up libwayland-client0:amd64 (1.24.0-2+b2) ...
- Setting up libnet-ssleay-perl:amd64 (1.96-1) ...
- Setting up libice6:amd64 (2:1.1.1-1+b1) ...
- Setting up libhttp-date-perl (6.06-1) ...
- Setting up liblapack3:amd64 (3.12.1-7+b1) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libfile-basedir-perl (0.09-2) ...
- Setting up libfile-listing-perl (6.16-1) ...
- Setting up libtirpc3t64:amd64 (1.3.7+ds-1) ...
- Setting up fontconfig-config (2.17.1-5) ...
- Setting up libxtst6:amd64 (2:1.2.5-1+b1) ...
- Setting up libauthen-sasl-perl (2.2000-1) ...
- Setting up libxcursor1:amd64 (1:1.2.3-1+b1) ...
- Setting up libnet-http-perl (6.24-1) ...
- Setting up libpaper-utils (2.2.5-0.3+b3) ...
- Setting up libthai0:amd64 (0.1.30-1) ...
- Setting up libfreetype6:amd64 (2.14.2+dfsg-1) ...
- Setting up libxkbcommon-x11-0:amd64 (1.13.1-1) ...
- Setting up ucf (3.0053) ...
- Setting up libfile-desktopentry-perl (0.23-1) ...
- Setting up libreadline8t64:amd64 (8.3-4) ...
- Setting up libwww-robotrules-perl (6.02-1) ...
- Setting up libdrm2:amd64 (2.4.131-1) ...
- Setting up libhtml-parser-perl:amd64 (3.83-1+b3) ...
- Setting up libharfbuzz0b:amd64 (12.3.2-2+b2) ...
- Setting up libfontconfig1:amd64 (2.17.1-5) ...
- Setting up libsm6:amd64 (2:1.2.6-1+b1) ...
- Setting up libio-socket-ssl-perl (2.098-1) ...
- Setting up libhttp-message-perl (7.01-1) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
- Setting up libhtml-form-perl (6.13-1) ...
- Setting up mesa-vulkan-drivers:amd64 (26.0.3-1) ...
- Setting up libfile-mimeinfo-perl (0.36-2) ...
- Setting up libhttp-negotiate-perl (6.01-2) ...
- Setting up fontconfig (2.17.1-5) ...
- Regenerating fonts cache...
- done.
- Setting up libxft2:amd64 (2.3.6-1+b5) ...
- Setting up libhttp-cookies-perl (6.11-1) ...
- Setting up libhtml-tree-perl (5.07-3) ...
- Setting up libtk8.6:amd64 (8.6.17-1+b1) ...
- Setting up libpango-1.0-0:amd64 (1.57.0-1) ...
- Setting up libdrm-intel1:amd64 (2.4.131-1) ...
- Setting up libhtml-format-perl (2.16-2) ...
- Setting up libcairo2:amd64 (1.18.4-3) ...
- Setting up libnet-smtp-ssl-perl (1.04-2) ...
- Setting up libmailtools-perl (2.22-1) ...
- Setting up libxt6t64:amd64 (1:1.2.1-1.3+b1) ...
- Setting up libhttp-daemon-perl (6.16-1) ...
- Setting up alacritty (0.16.1-2) ...
- update-alternatives: using /usr/bin/alacritty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode
- Setting up libpangoft2-1.0-0:amd64 (1.57.0-1) ...
- Setting up libpangocairo-1.0-0:amd64 (1.57.0-1) ...
- Setting up mesa-libgallium:amd64 (26.0.3-1) ...
- Setting up libxmu6:amd64 (2:1.1.3-4) ...
- Setting up libgbm1:amd64 (26.0.3-1) ...
- Setting up libgl1-mesa-dri:amd64 (26.0.3-1) ...
- Setting up libxaw7:amd64 (2:1.0.16-1+b1) ...
- Setting up x11-xserver-utils (7.7+11) ...
- Setting up r-base-core (4.5.3-1) ...
- Creating config file /etc/R/Renviron with new version
- Setting up r-cran-lattice (0.22-9-1) ...
- Setting up r-cran-nlme (3.1.168-1) ...
- Setting up r-cran-cluster (2.1.8.2-1) ...
- Setting up r-cran-nnet (7.3-20-1) ...
- Setting up r-cran-codetools (0.2-20-1) ...
- Setting up r-cran-boot (1.3-32-1) ...
- Setting up libglx-mesa0:amd64 (26.0.3-1) ...
- Setting up libglx0:amd64 (1.7.0-3) ...
- Setting up r-cran-spatial (7.3-18-1) ...
- Setting up r-cran-mass (7.3-65-1) ...
- Setting up r-cran-foreign (0.8.91-1) ...
- Setting up libgl1:amd64 (1.7.0-3) ...
- Setting up r-cran-matrix (1.7-5-1) ...
- Setting up r-cran-kernsmooth (2.23-26-1) ...
- Setting up r-cran-mgcv (1.9-4-1) ...
- Setting up x11-utils (7.7+7) ...
- Setting up r-cran-class (7.3-23-1) ...
- Setting up r-cran-survival (3.8-6-1) ...
- Setting up r-cran-rpart (4.1.27-1) ...
- Setting up r-recommended (4.5.3-1) ...
- Setting up liblwp-protocol-https-perl (6.15-1) ...
- Setting up libwww-perl (6.81-1) ...
- Setting up libxml-parser-perl (2.47-2) ...
- Setting up libxml-twig-perl (1:3.54-1) ...
- Setting up libnet-dbus-perl (1.2.0-2+b3) ...
- Processing triggers for libc-bin (2.42-14) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> retrieved conf-r.1.0.0 (cached)
Processing 2/12: [dolog.6.0.0: extract]
Processing 3/12: [dolog.6.0.0: extract] [dune.3.22.0: extract]
Processing 4/12: [dolog.6.0.0: extract] [dune.3.22.0: extract] [orsvm_e1071.4.0.0: http]
Processing 5/12: [dolog.6.0.0: extract] [dune.3.22.0: extract] [orsvm_e1071.4.0.0: http] [conf-r: R CMD]
-> retrieved dolog.6.0.0 (cached)
Processing 5/12: [dune.3.22.0: extract] [orsvm_e1071.4.0.0: http] [conf-r: R CMD]
Processing 5/12: [dune.3.22.0: extract] [orsvm_e1071.4.0.0: extract] [conf-r: R CMD]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "R" "CMD" "BATCH" "check.r" (CWD=/home/opam/.opam/5.2.0+flambda2/.opam-switch/build/conf-r.1.0.0)
-> compiled conf-r.1.0.0
Processing 5/12: [dune.3.22.0: extract] [orsvm_e1071.4.0.0: extract]
-> installed conf-r.1.0.0
Processing 6/12: [dune.3.22.0: extract] [orsvm_e1071.4.0.0: extract]
-> retrieved orsvm_e1071.4.0.0 (https://github.com/UnixJunkie/orsvm-e1071/archive/v4.0.0.tar.gz)
Processing 6/12: [dune.3.22.0: extract]
-> retrieved dune.3.22.0 (cached)
Processing 7/12: [dune: ocaml 71]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "ocaml" "boot/bootstrap.ml" "-j" "71" (CWD=/home/opam/.opam/5.2.0+flambda2/.opam-switch/build/dune.3.22.0)
- ocamlc -output-complete-exe -intf-suffix .dummy -g -o .duneboot.exe -I boot -I +unix unix.cma boot/types.ml boot/libs.ml boot/duneboot.ml
- ./.duneboot.exe -j 71
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads lmdb__Lmdb_bindings.ml
- File "lmdb__Lmdb_bindings.ml", line 64, characters 2-29:
- 64 | Callback.register_exception "LmdbExists" Exists;
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Callback.register_exception
- Use [Callback.Safe.register_exception].
-
- File "lmdb__Lmdb_bindings.ml", line 65, characters 2-29:
- 65 | Callback.register_exception "LmdbError" (Error 0);
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Callback.register_exception
- Use [Callback.Safe.register_exception].
-
- File "lmdb__Lmdb_bindings.ml", line 66, characters 2-29:
- 66 | Callback.register_exception "LmdbMapFull" (Map_full);
- ^^^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Callback.register_exception
- Use [Callback.Safe.register_exception].
-
- File "lmdb__Lmdb_bindings.ml", line 67, characters 2-27:
- 67 | Printexc.register_printer @@ begin function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads stdune__Code_error.ml
- File "stdune__Code_error.ml", line 30, characters 2-27:
- 30 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads notty_unix.ml
- File "notty_unix.ml", line 38, characters 23-29:
- 38 | let old_hdl = Sys.(signal signum (Signal_handle (fun _ -> f ()))) in
- ^^^^^^
- Alert unsafe_multidomain: Stdlib.Sys.signal
- Use [Sys.Safe.signal].
-
- File "notty_unix.ml", line 39, characters 31-45:
- 39 | `Revert (once @@ fun () -> Sys.set_signal signum old_hdl)
- ^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Sys.set_signal
- Use [Sys.Safe.set_signal].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads stdune__User_error.ml
- File "stdune__User_error.ml", line 58, characters 2-27:
- 58 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads opamStd.ml
- File "opamStd.ml", line 958, characters 10-24:
- 958 | try Sys.set_signal 28 (* SIGWINCH *)
- ^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Sys.set_signal
- Use [Sys.Safe.set_signal].
-
- File "opamStd.ml", line 1407, characters 4-15:
- 1407 | Unix.putenv "HOME" dir;
- ^^^^^^^^^^^
- Alert unsafe_multidomain: Unix.putenv
- Mutating the environment makes reading the environment unsafe.
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_scheduler__Shutdown.ml
- File "dune_scheduler__Shutdown.ml", line 37, characters 2-27:
- 37 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_private__Conv.ml
- File "dune_rpc_private__Conv.ml", line 49, characters 2-27:
- 49 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_private__Where.ml
- File "dune_rpc_private__Where.ml", line 23, characters 2-27:
- 23 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_private__Types.ml
- File "dune_rpc_private__Types.ml", line 159, characters 6-31:
- 159 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_private__Version_error.ml
- File "dune_rpc_private__Version_error.ml", line 23, characters 2-27:
- 23 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_private__Registry.ml
- File "dune_rpc_private__Registry.ml", line 68, characters 4-29:
- 68 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads opamSystem.ml
- File "opamSystem.ml", line 1248, characters 2-27:
- 1248 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
-
- File "opamSystem.ml", line 1264, characters 6-20:
- 1264 | try Sys.set_signal Sys.sigpipe (Sys.Signal_handle (fun _ -> ()))
- ^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Sys.set_signal
- Use [Sys.Safe.set_signal].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads memo.ml
- File "memo.ml", line 416, characters 2-27:
- 416 | Printexc.register_printer (fun exn ->
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_private__Client.ml
- File "dune_rpc_private__Client.ml", line 101, characters 2-27:
- 101 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_scheduler__Thread0.ml
- File "dune_scheduler__Thread0.ml", line 28, characters 11-25:
- 28 | Sys.set_signal (Signal.to_int signal) (Signal_handle (fun _ -> ())))
- ^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdune.Sys.set_signal
- Use [Sys.Safe.set_signal].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_scheduler__Signal_watcher.ml
- File "dune_scheduler__Signal_watcher.ml", line 23, characters 4-18:
- 23 | Sys.set_signal Sys.sigint (Signal_handle (fun _ -> assert (Unix.write w buf 0 1 = 1)));
- ^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdune.Sys.set_signal
- Use [Sys.Safe.set_signal].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_rpc_server.ml
- File "dune_rpc_server.ml", line 15, characters 2-27:
- 15 | Printexc.register_printer (function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads dune_tui.ml
- File "dune_tui.ml", line 15, characters 7-21:
- 15 | Sys.set_signal Sys.sigcont
- ^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Dune_tui__.Import.Sys.set_signal
- Use [Sys.Safe.set_signal].
-
- File "dune_tui.ml", line 23, characters 12-22:
- 23 | (Sys.signal Sys.sigtstp
- ^^^^^^^^^^
- Alert unsafe_multidomain: Dune_tui__.Import.Sys.signal
- Use [Sys.Safe.signal].
- cd _boot && /home/opam/.opam/5.2.0+flambda2/bin/ocamlopt.opt -c -g -no-alias-deps -w -49-23-53 -alert -unstable -I +unix -I +threads opamPp.ml
- File "opamPp.ml", line 64, characters 9-34:
- 64 | let () = Printexc.register_printer @@ function
- ^^^^^^^^^^^^^^^^^^^^^^^^^
- Alert unsafe_multidomain: Stdlib.Printexc.register_printer
- Use [Printexc.Safe.register_printer].
Processing 7/12: [dune: ./_boot/dune.exe build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./_boot/dune.exe" "build" "dune.install" "--release" "--profile" "dune-bootstrap" "-j" "71" (CWD=/home/opam/.opam/5.2.0+flambda2/.opam-switch/build/dune.3.22.0)
-> compiled dune.3.22.0
-> installed dune.3.22.0
Processing 9/12: [dolog: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dolog" "-j" "71" (CWD=/home/opam/.opam/5.2.0+flambda2/.opam-switch/build/dolog.6.0.0)
-> compiled dolog.6.0.0
-> installed dolog.6.0.0
Processing 11/12: [orsvm_e1071: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "orsvm_e1071" "-j" "71" (CWD=/home/opam/.opam/5.2.0+flambda2/.opam-switch/build/orsvm_e1071.4.0.0)
-> compiled orsvm_e1071.4.0.0
-> installed orsvm_e1071.4.0.0
Done.
<><> orsvm_e1071.4.0.0 installed successfully <><><><><><><><><><><><><><><><><>
=> Please interact with R to install needed things in user-space:
R
install.packages('e1071', repos='http://cran.r-project.org')
install.packages('svmpath', repos='http://cran.r-project.org')
# To update the current shell environment, run: eval $(opam env)
2026-04-01 10:21.34 ---> saved as "5f0624adb14ae82c73b4a22b706a5f79979cc1cc1a953bc8a169e7172a9ad3eb"
Job succeeded
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